Analysis of the gut microbiome of patients with rare monogenic metabolic diseases
Organizational Data
- DRKS-ID:
- DRKS00033718
- Recruitment Status:
- Recruiting ongoing
- Date of registration in DRKS:
- 2024-02-26
- Last update in DRKS:
- 2024-04-15
- Registration type:
- Prospective
Acronym/abbreviation of the study
MicroMeDi
URL of the study
No Entry
Brief summary in lay language
The human microbiome is defined as the sum of all microorganisms (bacteria, fungi and phages) living in the body or on its surface. Many of these organisms are associated with aspects of health and disease. The gut flora plays a central role in the development of the immune system and the metabolism. In some diseases, e.g. Alzheimer's, it has been shown that the gut flora has an influence on the course of the disease. The communication pathway between the gut flora and the brain is referred to as the "gut-brain axis". The communication arises from the fact that bacteria can also influence processes in the brain via the release or degradation of certain signal substances. It is assumed that one can influence the composition of the gut flora via the daily diet and thus one can also influence the communication via the gut-brain axis and influence some symptoms of a disease. In this study we want to learn more about the microbiome in the gut, skin and saliva of patients with rare monogenic metabolic diseases and compare it with the microbiome of carriers and healthy controls. We want to investigate whether there are differences in the amount and type of microorganisms and metabolites in patients with rare monogenic metabolic diseases compared to carriers and healthy controls. In addition, we want to find starting points for future treatments.
Brief summary in scientific language
Rare monogenetic metabolic diseases are caused by variants in genes encoding proteins involved in metabolic pathways. In general, these defects lead to (1) an accumulation of toxic metabolites as metabolic side reactions are utilized instead, and (2) reduced or absent production of the metabolite, leading to metabolic dead ends. In neurotransmitter defects, patients suffer from neurological phenotypes such as early-onset developmental delay, cognitive deficits, autonomic dysfunction and movement disorders, whereas patients with urea cycle defects show cognitive deterioration due to the accumulation of neurotoxic NH4+ in metabolic decompensation. The human microbiome is defined as the sum of all microorganisms (including bacteria, fungi and viruses) that live inside the body or on its surface. Neurodevelopment is closely linked to the gut microbiome. Accumulating studies point to a complex interplay between the microbiome and aspects of neurodegeneration, as seen in Parkinson's disease, Alzheimer's disease, multiple sclerosis and amyotrophic lateral sclerosis. An apparent communication pathway between the gut microbiome and the brain, the so-called "gut-brain axis", is based on the idea that bacteria can produce or consume neurotransmitters such as dopamine, serotonin or GABA. However, research has mainly focused on the microbiome of animals, such as rodents. In recent years, an increasing number of studies have been conducted on the human microbiome. Here, intervention-based approaches using prebiotics, probiotics, fecal transplantation and antibiotics have been used to identify key components of the microbiome that influence neurodevelopment. While this evidence suggests a clear influence of the microbiome on the development and function of the central nervous system, further research is needed. The aim of this study is to characterize the microbiome of patients with rare monogenetic metabolic diseases in order to lay the foundation for the development of future treatment options such as transfection, dietary changes and probiotic approaches to alleviate symptoms.
Health condition or problem studied
- Free text:
- Rare monogenic metabolic diseases
- Healthy volunteers:
- Yes
Interventions, Observational Groups
- Arm 1:
- Saliva swabs, skin surface swabs and stool samples will be done . There are no extra visits required for this study. Sampling of saliva and skin surface swabs will be included into the regular visits. If participants/ their representatives prefer, the sample collection can be done at home and shipped to Heidelberg. Two timepoints for sampling are planned per patient. Since the collection of the samples for laboratory analysis has no influence on the course of the disease and the treatment of the participants, no follow-up observation is planned. In addition to the patients, up to 30 healthy and 30 heterozygous carriers per disease will be included in the study as controls.
Endpoints
- Primary outcome:
- Investigate the taxonomic differences in the microbiome of a group of patients with a given monogenic metabolic disease, heterozygous carriers and region and age matched healthy controls.
- Secondary outcome:
- 1) Investigate qualitative differences of microbial genomes and genes in the salvia, skin and gut microbiome of patients with a given monogenic metabolic disease, heterozygous variant carriers and healthy controls. 2) Investigate differences in relative abundances of microbial genomes and genes in the salvia, skin and gut microbiome of patients with a given monogenic metabolic disease, variant carriers and healthy controls. 3) Identify targets for future treatment options.
Study Design
- Purpose:
- Basic research/physiological study
- Retrospective/prospective:
- Prospective
- Study type:
- Non-interventional
- Longitudinal/cross-sectional:
- Cross-sectional study
- Study type non-interventional:
- Epidemiological study
Recruitment
- Recruitment Status:
- Recruiting ongoing
- Reason if recruiting stopped or withdrawn:
- No Entry
Recruitment Locations
- Recruitment countries:
-
- Germany
- Number of study centers:
- Monocenter study
- Recruitment location(s):
-
- University medical center Zentrum für Kinder- und Jugendmedizin Heidelberg
Recruitment period and number of participants
- Planned study start date:
- 2024-03-15
- Actual study start date:
- 2024-04-03
- Planned study completion date:
- 2029-12-31
- Actual Study Completion Date:
- No Entry
- Target Sample Size:
- 500
- Final Sample Size:
- No Entry
Inclusion Criteria
- Sex:
- All
- Minimum Age:
- 3 Years
- Maximum Age:
- no maximum age
- Additional Inclusion Criteria:
- Children and adults - with confirmed diagnosis of a rare monogenic metabolic disease - who are heterozygous carriers of variants in a gene leading to a rare metabolic disease - who do not carry variants in a gene responsible for a rare monogenic metabolic disease. These serve as healthy controls (age and region matched to the patients)
Exclusion Criteria
- Active or recent illegal substance or alcohol abuse or dependence within the past year. - History of other significant medical disorders apart from rare monogenic metabolic disease (e.g. leukaemia, diabetes mellitus, renal failure…) - Use of antibiotics or probiotics within six months prior to sampling - Individuals having had digestive surgery, are on restrictive diets, or are pregnant
Addresses
Primary Sponsor
- Address:
- Universitätsklinikum HeidelbergKatrin ErkIm Neuenheimer Feld 67269120 HeidelbergGermany
- Telephone:
- +496221 56-7000
- Fax:
- +496221 56-4888
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- https://www.klinikum.uni-heidelberg.de/organisation/unternehmen/vorstand/detailseite-ke
- Investigator Sponsored/Initiated Trial (IST/IIT):
- Yes
Contact for Scientific Queries
- Address:
- Zentrum für Kinder- und JugendmedizinDr. Sabine Jung-KlawitterIm Neuenheimer Feld 66969120 HeidelbergGermany
- Telephone:
- +496221 564002
- Fax:
- No Entry
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- No Entry
Contact for Public Queries
- Address:
- Zentrum für Kinder- und JugendmedizinDr. Sabine Jung-KlawitterIm Neuenheimer Feld 66969120 HeidelbergGermany
- Telephone:
- +496221 564002
- Fax:
- No Entry
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- No Entry
Principal Investigator
- Address:
- Zentrum für Kinder- und JugendmedizinDr. Sabine Jung-KlawitterIm Neuenheimer Feld 66969120 HeidelbergGermany
- Telephone:
- +496221 564002
- Fax:
- No Entry
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- No Entry
Sources of Monetary or Material Support
Public funding institutions financed by tax money/Government funding body (German Research Foundation (DFG), Federal Ministry of Education and Research (BMBF), etc.)
- Address:
- Deutsche Forschungsgemeinschaft e.V.Kennedyallee 4053175 BonnGermany
- Telephone:
- +49 (228) 885-1
- Fax:
- +49 (228) 885-2777
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- http://www.dfg.de
Ethics Committee
Address Ethics Committee
- Address:
- Ethikkommission der Medizinischen Fakultät HeidelbergAlte Glockengießerei 11/169115 HeidelbergGermany
- Telephone:
- +49-6221-5626460
- Fax:
- No Entry
- Contact per E-Mail:
- Contact per E-Mail
- URL:
- http://www.medizinische-fakultaet-hd.uni-heidelberg.de/einrichtungen/zentrale-einrichtungen/ethikkommission
Vote of leading Ethics Committee
- Vote of leading Ethics Committee
- Date of ethics committee application:
- 2023-05-08
- Ethics committee number:
- S-278/2023
- Vote of the Ethics Committee:
- Approved
- Date of the vote:
- 2023-07-13
Further identification numbers
- Other primary registry ID:
- No Entry
- EudraCT Number:
- No Entry
IPD - Individual Participant Data
- Do you plan to make participant-related data (IPD) available to other researchers in an anonymized form?:
- No
- IPD Sharing Plan:
- No Entry
Study protocol and other study documents
- Study protocols:
- No Entry
- Study abstract:
- No Entry
- Other study documents:
- No Entry
- Background literature:
- No Entry
- Related DRKS studies:
- No Entry
Publication of study results
- Planned publication:
- No Entry
- Publikationen/Studienergebnisse:
- No Entry
- Date of first publication of study results:
- No Entry
- DRKS entry published for the first time with results:
- No Entry
Basic reporting
- Basic Reporting / Results tables:
- No Entry
- Brief summary of results:
- No Entry